Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015908135.1_cds_XP_016458244.1_51890
CDS Infomation

[gene=LOC107781939] [db_xref=GeneID:107781939] [protein=heterogeneous nuclear ribonucleoprotein U-like protein 1] [protein_id=XP_016458244.1] [location=complement(join(48236..48339,48869..49198,49291..49483,49567..49625,49732..49840,49958..50146,50278..51041,54628..54760))] [gbkey=CDS]
Sequence

ATGGCATCGACGAAACGTGAATCCTGTATAAGCGATGAACCTGAAGCCAAGAAAGCAAAG
GTTGAAGAAGGGCCATCACAGCTTCCAGTATCCACACCCCGTGTGGTCCTTAACCCCGCC
GATTGTGACTTAGATTTCAATGTTGAAGGAAATGGATTACAAGGTTCAGCGCTTTATGAG
CAAGGATTTGCTTATTGTTGGTCAGGTGCTCGAGCCAATATGGGAATCACTGGAGGAAAG
TACTGCTTTGGTTGCAGAATCGTTTCAGATCAGCCTGTAGACATGGAAGATACACCACTA
GATCAGCAACATCTCTGTCGTGTTGGCATCTCAAGGGGAGATGATGCAGTAGGAAACCTT
GGGGAAACCCTTCATAGTTTTGGGTTTGGGGGTACTGGAAAATTTTCAAGTCATGGACAG
TTTTCTGAATATGGTGAAAAATTTGGGGTTGGTGACACCATAATTTGTTGTGTTGACCTT
GAGTCTAGCCCTTTGGCATCCATAGGTTTCTCTAAAAATGGGAAGTGGCTGGGAATAGCA
AAGCAATTTAATGCAGGTCCAACTGGCCATGAAGTGGTGGATTGTCCAATGAAAAATCTA
CAATGGCATTCAGCTCTTTTCCCTCATGTCTTGCTTAAAAATGTAGTTGTGCACATGCAG
TTTAGCATAGACGACGGATTAGCTCCTGTGGAAGGATATAGACCATGGTCTTGTGCCATG
GAAGATGGGAAAGCCATAACAGGCCCTAGCTTTCTGAATCTGTGTGATTGTGAAGTTATG
ATGATGGTGGGACTGCCTGCTTCCGGCAAGAGTACCTGGGCTGAGAAATGGGCGATGGAA
CATGCAGAAAAGCGATATCTTTTGCTTGGAACTAATTTGGCTTTGGATCTAATGAAGGTT
CCTGGTTTGCTGCGCAAAAATAACTATGGTGAAAGATTTGAACGTTTAATGGACCGTGCT
ACTGGTATATTCAACACTCTTTTGTCTAGGGCTTCCCAGATTCCTCGTAATTTCATAATT
GATCAGACAAATGTCTACAAAAATGCCCGGAAGCGCAAATTGAAGCCTTTTGCAAACTAT
AAGAAGATTGCTGTTGTGATTGTTCCAACACCTGAAGAGCTCAAGCTCCGTGGTGAGAAG
CGATTCAAAGAAATGGGCAAGGAGGTTCCTGCCGAAGCAGTAAATGAAATGTTAGTGAAT
TTTGTTTTACCTACGAGCAAAGATATGCCTCGAGCAGATGAGTACTTTGATGAGGTACGT
TTTAAAGAACTTGGCAGAGCGGAGGCTCAGAGATGCTTGGATGAGATGAAAGCAAACGTA
AATTCAAAGAGGGAAGTTACCCCTTATTCTCGTGAAAGTTCTGTGCAGTCACTTAATAGC
CCATCAATGCAGCGCCATTGCCAATCATACAGTGGTTCCTCATTGCTGAGTCACAGAAAT
TTATCAGGTGGACATCCAAATAGTTCATATGCTCAGCCTCCACTGCAAGCACCTCGTGAA
ACCTACTTCGCGACCCCTTCCAGTTATGACTCCATGGGTGATTTTGGTCATGGAAGTCGC
AGTGCCTACGACAATTCAAGGGGATATGAGATGGAAGCTCAATCAGCAATCCATGGAGGG
ATTTATGAACCTCATGGGGGATATGGAGCTTGGAATGCAACTGAGTTACACCGGAGCAGC
ATGAATGATCCCTACTTAAGAACGACTGGTGGTCCAAGATATCTGCCACCTGACTCAAGA
GGAACTGCATTTGAATCGAGGATGCCAGCACCATATGGCTTTCCTCATGGGATTCCAGCT
CCAAGACCGCCATATGGAAATTTTCCTTCCGGAGCACAGCATCCTGGAGTATACACTCCA
CCTCGTCCCAGATACTACTGA

Peptide Sequence

PEP ID

XP_016458244.1
PEP Infomation

PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 1 [Nicotiana tabacum]
Sequence

MASTKRESCISDEPEAKKAKVEEGPSQLPVSTPRVVLNPADCDLDFNVEGNGLQGSALYE
QGFAYCWSGARANMGITGGKYCFGCRIVSDQPVDMEDTPLDQQHLCRVGISRGDDAVGNL
GETLHSFGFGGTGKFSSHGQFSEYGEKFGVGDTIICCVDLESSPLASIGFSKNGKWLGIA
KQFNAGPTGHEVVDCPMKNLQWHSALFPHVLLKNVVVHMQFSIDDGLAPVEGYRPWSCAM
EDGKAITGPSFLNLCDCEVMMMVGLPASGKSTWAEKWAMEHAEKRYLLLGTNLALDLMKV
PGLLRKNNYGERFERLMDRATGIFNTLLSRASQIPRNFIIDQTNVYKNARKRKLKPFANY
KKIAVVIVPTPEELKLRGEKRFKEMGKEVPAEAVNEMLVNFVLPTSKDMPRADEYFDEVR
FKELGRAEAQRCLDEMKANVNSKREVTPYSRESSVQSLNSPSMQRHCQSYSGSSLLSHRN
LSGGHPNSSYAQPPLQAPRETYFATPSSYDSMGDFGHGSRSAYDNSRGYEMEAQSAIHGG
IYEPHGGYGAWNATELHRSSMNDPYLRTTGGPRYLPPDSRGTAFESRMPAPYGFPHGIPA
PRPPYGNFPSGAQHPGVYTPPRPRYY

Transcript Sequence

Gene sequence data has not been registered.